Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 MIR346-201ENST00000362234 95 ntBASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 KRT18P32-201ENST00000424695 1287 ntBASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 FAM58DP-201ENST00000428076 619 ntBASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 AC027612.4-201ENST00000605371 583 ntBASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 AL589702.1-201ENST00000641229 1509 ntBASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LYSMD3Q7Z3D4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LYSMD3Q7Z3D4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.39■□□□□ 0.22
LYSMD3Q7Z3D4 U82695.1-201ENST00000635752 1889 ntBASIC16.39■□□□□ 0.22
LYSMD3Q7Z3D4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LYSMD3Q7Z3D4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
LYSMD3Q7Z3D4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 AC007950.2-201ENST00000615045 2347 ntBASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LYSMD3Q7Z3D4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 HYMAI-201ENST00000635591 3347 ntBASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LYSMD3Q7Z3D4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms