Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA11P31270 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HOXA11P31270 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXA11P31270 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXA11P31270 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HOXA11P31270 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA11P31270 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HOXA11P31270 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA11P31270 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA11P31270 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HOXA11P31270 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA11P31270 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXA11P31270 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HOXA11P31270 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 CR383656.12-201ENST00000549567 513 ntBASIC17.47■□□□□ 0.39
HOXA11P31270 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
HOXA11P31270 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.47■□□□□ 0.39
HOXA11P31270 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXA11P31270 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXA11P31270 AL358472.5-202ENST00000641448 1267 ntBASIC17.47■□□□□ 0.39
HOXA11P31270 SLC7A15P-201ENST00000424028 1363 ntBASIC17.47■□□□□ 0.39
HOXA11P31270 AL391825.1-201ENST00000457671 1364 ntBASIC17.47■□□□□ 0.39
HOXA11P31270 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HOXA11P31270 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA11P31270 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXA11P31270 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA11P31270 PCDHA14-201ENST00000506751 2298 ntBASIC17.46■□□□□ 0.39
HOXA11P31270 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.46■□□□□ 0.39
HOXA11P31270 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
HOXA11P31270 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA11P31270 COX5BP8-201ENST00000416911 349 ntBASIC17.46■□□□□ 0.39
HOXA11P31270 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXA11P31270 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.46■□□□□ 0.39
HOXA11P31270 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXA11P31270 AC140912.1-201ENST00000577171 1054 ntBASIC17.46■□□□□ 0.39
HOXA11P31270 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA11P31270 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA11P31270 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 AC006449.6-201ENST00000612330 2296 ntBASIC17.46■□□□□ 0.39
HOXA11P31270 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.46■□□□□ 0.39
HOXA11P31270 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA11P31270 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA11P31270 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.46■□□□□ 0.39
HOXA11P31270 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXA11P31270 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.46■□□□□ 0.38
HOXA11P31270 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA11P31270 HCG11-201ENST00000411553 5696 ntBASIC17.45■□□□□ 0.38
HOXA11P31270 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXA11P31270 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXA11P31270 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXA11P31270 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA11P31270 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA11P31270 DGCR5-201ENST00000399539 862 ntBASIC17.45■□□□□ 0.38
HOXA11P31270 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXA11P31270 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HOXA11P31270 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXA11P31270 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA11P31270 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXA11P31270 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXA11P31270 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXA11P31270 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA11P31270 AC134407.2-201ENST00000625089 1978 ntBASIC17.45■□□□□ 0.38
HOXA11P31270 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA11P31270 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms