Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 AC060834.1-201ENST00000443027 2032 ntBASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 ACE-204ENST00000428043 5120 ntTSL 2 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 AL162726.2-201ENST00000438986 1017 ntBASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 TDH-203ENST00000531764 1110 ntBASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 AL133338.1-201ENST00000565695 1517 ntBASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 AC093525.8-201ENST00000624099 1342 ntBASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CSB-PGBD3P0DP91 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 Z97205.2-201ENST00000564697 1639 ntBASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 MGST3-203ENST00000367885 680 ntTSL 2 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 NME6-203ENST00000415644 849 ntTSL 2 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 AC084346.2-201ENST00000607097 949 ntBASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 AL158212.4-201ENST00000624062 1286 ntBASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSB-PGBD3P0DP91 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 AL583810.1-201ENST00000553344 1045 ntBASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 MIR5189-201ENST00000577370 114 ntBASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
CSB-PGBD3P0DP91 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
CSB-PGBD3P0DP91 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms