Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 AL161772.1-201ENST00000610494 4412 ntBASIC14.73□□□□□ -0.05
HLA-DPB1P04440 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 LINC00982-205ENST00000420957 435 ntBASIC14.73□□□□□ -0.05
HLA-DPB1P04440 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 PRYP5-201ENST00000451909 266 ntBASIC14.73□□□□□ -0.05
HLA-DPB1P04440 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 LINC02228-204ENST00000642115 2962 ntBASIC14.73□□□□□ -0.05
HLA-DPB1P04440 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 AL031731.1-201ENST00000642131 2094 ntBASIC14.73□□□□□ -0.05
HLA-DPB1P04440 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-DPB1P04440 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 AL512652.2-201ENST00000625156 1716 ntBASIC14.72□□□□□ -0.05
HLA-DPB1P04440 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 AC023157.3-201ENST00000619086 2088 ntBASIC14.72□□□□□ -0.05
HLA-DPB1P04440 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 FAM197Y8-203ENST00000450145 560 ntBASIC14.72□□□□□ -0.05
HLA-DPB1P04440 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 AL031008.1-201ENST00000619963 541 ntBASIC14.72□□□□□ -0.05
HLA-DPB1P04440 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 AP002414.2-201ENST00000591780 3365 ntBASIC14.72□□□□□ -0.05
HLA-DPB1P04440 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 LINC01144-201ENST00000626198 1710 ntBASIC14.72□□□□□ -0.05
HLA-DPB1P04440 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 REXO1L8P-201ENST00000604378 1897 ntBASIC14.72□□□□□ -0.05
HLA-DPB1P04440 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPB1P04440 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPB1P04440 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms