Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC134698.3-201ENST00000523880 214 ntBASIC17.43■□□□□ 0.38
ALPK3Q96L96 AC009486.1-201ENST00000569860 813 ntBASIC17.43■□□□□ 0.38
ALPK3Q96L96 MIR3907-201ENST00000579424 151 ntBASIC17.43■□□□□ 0.38
ALPK3Q96L96 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.43■□□□□ 0.38
ALPK3Q96L96 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ALPK3Q96L96 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ALPK3Q96L96 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 AC092068.3-201ENST00000587894 2016 ntBASIC17.42■□□□□ 0.38
ALPK3Q96L96 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 FAM197Y7-201ENST00000432892 766 ntBASIC17.42■□□□□ 0.38
ALPK3Q96L96 SLED1-202ENST00000512051 380 ntBASIC17.42■□□□□ 0.38
ALPK3Q96L96 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALPK3Q96L96 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 PCDHB18P-201ENST00000524813 2368 ntBASIC17.42■□□□□ 0.38
ALPK3Q96L96 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.42■□□□□ 0.38
ALPK3Q96L96 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 NKAIN1P1-201ENST00000435754 582 ntBASIC17.41■□□□□ 0.38
ALPK3Q96L96 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 U82695.1-201ENST00000635752 1889 ntBASIC17.41■□□□□ 0.38
ALPK3Q96L96 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 SERPINA13P-202ENST00000478994 924 ntBASIC17.41■□□□□ 0.38
ALPK3Q96L96 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 IQSEC3P1-201ENST00000538799 536 ntBASIC17.41■□□□□ 0.38
ALPK3Q96L96 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.41■□□□□ 0.38
ALPK3Q96L96 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALPK3Q96L96 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALPK3Q96L96 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ALPK3Q96L96 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.4■□□□□ 0.38
ALPK3Q96L96 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALPK3Q96L96 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALPK3Q96L96 PCGF3-213ENST00000620529 1899 ntBASIC17.4■□□□□ 0.38
ALPK3Q96L96 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ALPK3Q96L96 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ALPK3Q96L96 AC018470.1-201ENST00000624790 3129 ntBASIC17.4■□□□□ 0.38
ALPK3Q96L96 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALPK3Q96L96 RNU1-114P-201ENST00000365297 166 ntBASIC17.4■□□□□ 0.38
ALPK3Q96L96 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
ALPK3Q96L96 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.4■□□□□ 0.38
ALPK3Q96L96 AL627389.1-201ENST00000413508 1182 ntBASIC17.4■□□□□ 0.38
ALPK3Q96L96 AC069218.1-201ENST00000435269 762 ntBASIC17.4■□□□□ 0.38
ALPK3Q96L96 RN7SL720P-201ENST00000488178 304 ntBASIC17.4■□□□□ 0.38
ALPK3Q96L96 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.4■□□□□ 0.38
ALPK3Q96L96 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALPK3Q96L96 AC005730.2-201ENST00000564549 1184 ntBASIC17.4■□□□□ 0.38
ALPK3Q96L96 RN7SL555P-201ENST00000584742 339 ntBASIC17.4■□□□□ 0.38
ALPK3Q96L96 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.4■□□□□ 0.38
ALPK3Q96L96 AC000095.1-201ENST00000603208 874 ntBASIC17.4■□□□□ 0.38
ALPK3Q96L96 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALPK3Q96L96 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALPK3Q96L96 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.4■□□□□ 0.38
ALPK3Q96L96 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.4■□□□□ 0.38
ALPK3Q96L96 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALPK3Q96L96 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms