Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHDQ96IW2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
SHDQ96IW2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 AL136982.4-201ENST00000437689 1740 ntBASIC16.33■□□□□ 0.2
SHDQ96IW2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.33■□□□□ 0.2
SHDQ96IW2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SHDQ96IW2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SHDQ96IW2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHDQ96IW2 AC092068.3-201ENST00000587894 2016 ntBASIC16.33■□□□□ 0.2
SHDQ96IW2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SHDQ96IW2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.33■□□□□ 0.2
SHDQ96IW2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.32■□□□□ 0.2
SHDQ96IW2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.32■□□□□ 0.2
SHDQ96IW2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 AC004945.1-201ENST00000416738 983 ntBASIC16.32■□□□□ 0.2
SHDQ96IW2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.32■□□□□ 0.2
SHDQ96IW2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.32■□□□□ 0.2
SHDQ96IW2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.32■□□□□ 0.2
SHDQ96IW2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.32■□□□□ 0.2
SHDQ96IW2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SHDQ96IW2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.32■□□□□ 0.2
SHDQ96IW2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.32■□□□□ 0.2
SHDQ96IW2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.32■□□□□ 0.2
SHDQ96IW2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.32■□□□□ 0.2
SHDQ96IW2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.32■□□□□ 0.2
SHDQ96IW2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.32■□□□□ 0.2
SHDQ96IW2 AL359711.2-201ENST00000563105 872 ntBASIC16.32■□□□□ 0.2
SHDQ96IW2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.32■□□□□ 0.2
SHDQ96IW2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.32■□□□□ 0.2
SHDQ96IW2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.32■□□□□ 0.2
SHDQ96IW2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.32■□□□□ 0.2
SHDQ96IW2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 LINC01115-203ENST00000606068 577 ntBASIC16.32■□□□□ 0.2
SHDQ96IW2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SHDQ96IW2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.32■□□□□ 0.2
SHDQ96IW2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SHDQ96IW2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SHDQ96IW2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHDQ96IW2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
SHDQ96IW2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SHDQ96IW2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.31■□□□□ 0.2
SHDQ96IW2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.31■□□□□ 0.2
SHDQ96IW2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
SHDQ96IW2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 AC004987.2-201ENST00000395959 1148 ntBASIC16.31■□□□□ 0.2
SHDQ96IW2 AC092506.1-202ENST00000401022 528 ntBASIC16.31■□□□□ 0.2
SHDQ96IW2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.31■□□□□ 0.2
SHDQ96IW2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.31■□□□□ 0.2
SHDQ96IW2 AP001889.1-201ENST00000525414 633 ntBASIC16.31■□□□□ 0.2
SHDQ96IW2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.31■□□□□ 0.2
SHDQ96IW2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.31■□□□□ 0.2
SHDQ96IW2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SHDQ96IW2 AC243960.2-201ENST00000600996 747 ntBASIC16.31■□□□□ 0.2
SHDQ96IW2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.31■□□□□ 0.2
SHDQ96IW2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 AC008764.6-201ENST00000595909 2069 ntBASIC16.31■□□□□ 0.2
SHDQ96IW2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.31■□□□□ 0.2
SHDQ96IW2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHDQ96IW2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms