Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 AL513523.2-202ENST00000427283 2040 ntBASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 SPCS2P4-201ENST00000436160 681 ntBASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 AC112482.1-201ENST00000492080 688 ntBASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 AL589702.1-201ENST00000641229 1509 ntBASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 AL391005.1-201ENST00000623953 2435 ntBASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
ATPAF2Q8N5M1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 AC026691.1-201ENST00000602502 2017 ntBASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 KRT18P13-201ENST00000400056 1290 ntBASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 AL592309.1-201ENST00000443127 649 ntBASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.72■□□□□ 0.27
ATPAF2Q8N5M1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms