Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL596257.1-201ENST00000641463 2694 ntBASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.39■□□□□ 0.38
CTC1Q2NKJ3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CTC1Q2NKJ3 KRT8P49-201ENST00000604166 1432 ntBASIC17.39■□□□□ 0.38
CTC1Q2NKJ3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 AC073439.1-201ENST00000624121 1774 ntBASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 TTTY23B-201ENST00000442790 549 ntBASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 RN7SL618P-201ENST00000477850 296 ntBASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 SPDYE18-201ENST00000510091 1050 ntBASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 MIR4525-201ENST00000580000 75 ntBASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 AC099568.2-201ENST00000609194 695 ntBASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTC1Q2NKJ3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 AC055876.2-201ENST00000531834 546 ntBASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 AC044860.1-202ENST00000559481 777 ntBASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 AP005482.1-201ENST00000563722 1273 ntBASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 COX11-210ENST00000639671 696 ntBASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 AC026691.1-201ENST00000602502 2017 ntBASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.38■□□□□ 0.37
CTC1Q2NKJ3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 PCDHB17P-201ENST00000539533 2393 ntBASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms