Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 AP001282.1-201ENST00000531301 1499 ntBASIC19.6■□□□□ 0.73
RFX7Q2KHR2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX7Q2KHR2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 RPL37AP1-201ENST00000412502 279 ntBASIC19.59■□□□□ 0.73
RFX7Q2KHR2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 RNA5SP410-201ENST00000516285 106 ntBASIC19.59■□□□□ 0.73
RFX7Q2KHR2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 AC009407.1-201ENST00000568958 598 ntBASIC19.59■□□□□ 0.73
RFX7Q2KHR2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 AC008738.7-201ENST00000609744 511 ntBASIC19.59■□□□□ 0.73
RFX7Q2KHR2 AL035252.4-201ENST00000624174 288 ntBASIC19.59■□□□□ 0.73
RFX7Q2KHR2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 AC090340.1-201ENST00000620778 4980 ntBASIC19.59■□□□□ 0.73
RFX7Q2KHR2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX7Q2KHR2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.58■□□□□ 0.73
RFX7Q2KHR2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.58■□□□□ 0.73
RFX7Q2KHR2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 AP005018.1-201ENST00000525475 301 ntBASIC19.58■□□□□ 0.73
RFX7Q2KHR2 AC105021.1-202ENST00000570572 669 ntBASIC19.58■□□□□ 0.73
RFX7Q2KHR2 AC004790.1-201ENST00000612686 536 ntBASIC19.58■□□□□ 0.73
RFX7Q2KHR2 AC009118.2-201ENST00000613275 655 ntBASIC19.58■□□□□ 0.73
RFX7Q2KHR2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX7Q2KHR2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms