Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 AL355334.1-201ENST00000417713 215 ntBASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 AC023310.1-201ENST00000554836 735 ntBASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 BAATP1-201ENST00000412284 1225 ntBASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 KRT90P-201ENST00000549264 1064 ntBASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 AC138627.1-207ENST00000641560 1006 ntBASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RSPO4Q2I0M5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 HCG11-201ENST00000411553 5696 ntBASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 AC114501.1-201ENST00000445949 172 ntBASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 AC004898.1-201ENST00000451057 766 ntBASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 AL591846.1-201ENST00000451736 433 ntBASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 IMP3P2-201ENST00000489760 475 ntBASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 CHMP4BP1-201ENST00000556017 588 ntBASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 AC061975.2-201ENST00000581722 295 ntBASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.67■□□□□ 0.1
RSPO4Q2I0M5 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms