Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CMC4P56277 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.15□□□□□ -0.46
CMC4P56277 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CMC4P56277 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CMC4P56277 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 TSEN15P1-201ENST00000423257 515 ntBASIC12.15□□□□□ -0.46
CMC4P56277 CNN2P2-201ENST00000443536 909 ntBASIC12.15□□□□□ -0.46
CMC4P56277 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.15□□□□□ -0.46
CMC4P56277 CNN2P3-201ENST00000450201 906 ntBASIC12.15□□□□□ -0.46
CMC4P56277 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CMC4P56277 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.15□□□□□ -0.46
CMC4P56277 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.15□□□□□ -0.46
CMC4P56277 RARRES2P9-201ENST00000565168 469 ntBASIC12.15□□□□□ -0.46
CMC4P56277 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
CMC4P56277 AC018529.1-201ENST00000613063 361 ntBASIC12.15□□□□□ -0.46
CMC4P56277 AL136317.3-201ENST00000618497 906 ntBASIC12.15□□□□□ -0.46
CMC4P56277 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.15□□□□□ -0.46
CMC4P56277 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CMC4P56277 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CMC4P56277 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.15□□□□□ -0.46
CMC4P56277 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
CMC4P56277 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
CMC4P56277 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CMC4P56277 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CMC4P56277 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CMC4P56277 OR2I1P-209ENST00000641730 5365 ntBASIC12.15□□□□□ -0.47
CMC4P56277 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.14□□□□□ -0.47
CMC4P56277 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 AP3S2-216ENST00000617003 1561 ntBASIC12.14□□□□□ -0.47
CMC4P56277 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CMC4P56277 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CMC4P56277 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CMC4P56277 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.14□□□□□ -0.47
CMC4P56277 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 MIR648-201ENST00000385046 94 ntBASIC12.14□□□□□ -0.47
CMC4P56277 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.14□□□□□ -0.47
CMC4P56277 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
CMC4P56277 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.14□□□□□ -0.47
CMC4P56277 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.14□□□□□ -0.47
CMC4P56277 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.14□□□□□ -0.47
CMC4P56277 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.14□□□□□ -0.47
CMC4P56277 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.14□□□□□ -0.47
CMC4P56277 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.14□□□□□ -0.47
CMC4P56277 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.14□□□□□ -0.47
CMC4P56277 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 LINC00628-201ENST00000628516 1289 ntBASIC12.14□□□□□ -0.47
CMC4P56277 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.14□□□□□ -0.47
CMC4P56277 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.14□□□□□ -0.47
CMC4P56277 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CMC4P56277 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CMC4P56277 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CMC4P56277 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.13□□□□□ -0.47
CMC4P56277 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CMC4P56277 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.13□□□□□ -0.47
CMC4P56277 AC022211.2-201ENST00000585075 2527 ntBASIC12.13□□□□□ -0.47
CMC4P56277 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CMC4P56277 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CMC4P56277 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CMC4P56277 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CMC4P56277 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.13□□□□□ -0.47
CMC4P56277 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms