Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.11□□□□□ -0.15
HCFC1P51610 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HCFC1P51610 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.11□□□□□ -0.15
HCFC1P51610 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.11□□□□□ -0.15
HCFC1P51610 AL136982.4-201ENST00000437689 1740 ntBASIC14.11□□□□□ -0.15
HCFC1P51610 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 SPDYE17-201ENST00000412399 783 ntBASIC14.11□□□□□ -0.15
HCFC1P51610 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.11□□□□□ -0.15
HCFC1P51610 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.11□□□□□ -0.15
HCFC1P51610 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.11□□□□□ -0.15
HCFC1P51610 AC093726.1-201ENST00000608064 963 ntBASIC14.11□□□□□ -0.15
HCFC1P51610 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HCFC1P51610 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.11□□□□□ -0.15
HCFC1P51610 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HCFC1P51610 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.11□□□□□ -0.15
HCFC1P51610 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HCFC1P51610 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.11□□□□□ -0.15
HCFC1P51610 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.11□□□□□ -0.15
HCFC1P51610 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.11□□□□□ -0.15
HCFC1P51610 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HCFC1P51610 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCFC1P51610 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.1□□□□□ -0.15
HCFC1P51610 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HCFC1P51610 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.1□□□□□ -0.15
HCFC1P51610 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.1□□□□□ -0.15
HCFC1P51610 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.1□□□□□ -0.15
HCFC1P51610 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.1□□□□□ -0.15
HCFC1P51610 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.1□□□□□ -0.15
HCFC1P51610 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.1□□□□□ -0.15
HCFC1P51610 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.1□□□□□ -0.15
HCFC1P51610 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.1□□□□□ -0.15
HCFC1P51610 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.1□□□□□ -0.15
HCFC1P51610 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.1□□□□□ -0.15
HCFC1P51610 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.1□□□□□ -0.15
HCFC1P51610 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.1□□□□□ -0.15
HCFC1P51610 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.1□□□□□ -0.15
HCFC1P51610 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HCFC1P51610 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.1□□□□□ -0.15
HCFC1P51610 AL139010.1-201ENST00000454878 894 ntBASIC14.1□□□□□ -0.15
HCFC1P51610 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.1□□□□□ -0.15
HCFC1P51610 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.1□□□□□ -0.15
HCFC1P51610 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.1□□□□□ -0.15
HCFC1P51610 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.1□□□□□ -0.15
HCFC1P51610 AL512343.1-201ENST00000605837 169 ntBASIC14.1□□□□□ -0.15
HCFC1P51610 RPSAP52-203ENST00000622976 1023 ntBASIC14.1□□□□□ -0.15
HCFC1P51610 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HCFC1P51610 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HCFC1P51610 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HCFC1P51610 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
HCFC1P51610 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HCFC1P51610 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.09□□□□□ -0.15
HCFC1P51610 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.09□□□□□ -0.15
HCFC1P51610 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCFC1P51610 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HCFC1P51610 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.09□□□□□ -0.15
HCFC1P51610 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.09□□□□□ -0.15
HCFC1P51610 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms