Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.24■□□□□ 0.51
COL11A1P12107 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.24■□□□□ 0.51
COL11A1P12107 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.24■□□□□ 0.51
COL11A1P12107 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL11A1P12107 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
COL11A1P12107 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 AC006449.6-201ENST00000612330 2296 ntBASIC18.24■□□□□ 0.51
COL11A1P12107 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.24■□□□□ 0.51
COL11A1P12107 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COL11A1P12107 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL11A1P12107 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.24■□□□□ 0.51
COL11A1P12107 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.24■□□□□ 0.51
COL11A1P12107 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL11A1P12107 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL11A1P12107 AC068587.3-201ENST00000526613 355 ntBASIC18.23■□□□□ 0.51
COL11A1P12107 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.23■□□□□ 0.51
COL11A1P12107 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.23■□□□□ 0.51
COL11A1P12107 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
COL11A1P12107 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COL11A1P12107 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.23■□□□□ 0.51
COL11A1P12107 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL11A1P12107 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.23■□□□□ 0.51
COL11A1P12107 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.23■□□□□ 0.51
COL11A1P12107 FAM86LP-201ENST00000478302 853 ntBASIC18.23■□□□□ 0.51
COL11A1P12107 AC104989.1-201ENST00000519711 778 ntBASIC18.23■□□□□ 0.51
COL11A1P12107 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.23■□□□□ 0.51
COL11A1P12107 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.23■□□□□ 0.51
COL11A1P12107 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.23■□□□□ 0.51
COL11A1P12107 AC107373.2-201ENST00000607735 490 ntBASIC18.23■□□□□ 0.51
COL11A1P12107 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.23■□□□□ 0.51
COL11A1P12107 CU634019.7-201ENST00000624153 1185 ntBASIC18.23■□□□□ 0.51
COL11A1P12107 FP236241.2-201ENST00000624906 1185 ntBASIC18.23■□□□□ 0.51
COL11A1P12107 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 COX11-210ENST00000639671 696 ntBASIC18.23■□□□□ 0.51
COL11A1P12107 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
COL11A1P12107 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.23■□□□□ 0.51
COL11A1P12107 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COL11A1P12107 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COL11A1P12107 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL11A1P12107 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COL11A1P12107 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.22■□□□□ 0.51
COL11A1P12107 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.22■□□□□ 0.51
COL11A1P12107 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.22■□□□□ 0.51
COL11A1P12107 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL11A1P12107 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COL11A1P12107 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL11A1P12107 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL11A1P12107 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COL11A1P12107 FAM86MP-201ENST00000340703 885 ntBASIC18.22■□□□□ 0.51
COL11A1P12107 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL11A1P12107 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.22■□□□□ 0.51
COL11A1P12107 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.22■□□□□ 0.51
COL11A1P12107 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL11A1P12107 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL11A1P12107 TIMM17BP1-201ENST00000545713 516 ntBASIC18.22■□□□□ 0.51
COL11A1P12107 AC120045.2-201ENST00000567334 178 ntBASIC18.22■□□□□ 0.51
COL11A1P12107 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.22■□□□□ 0.51
COL11A1P12107 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.22■□□□□ 0.51
COL11A1P12107 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL11A1P12107 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COL11A1P12107 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL11A1P12107 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL11A1P12107 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL11A1P12107 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COL11A1P12107 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COL11A1P12107 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.22■□□□□ 0.51
COL11A1P12107 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.22■□□□□ 0.51
COL11A1P12107 KRT8P22-201ENST00000562317 1415 ntBASIC18.22■□□□□ 0.51
COL11A1P12107 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.21■□□□□ 0.51
COL11A1P12107 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.21■□□□□ 0.51
COL11A1P12107 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 SOCS2P1-201ENST00000417727 557 ntBASIC18.21■□□□□ 0.51
COL11A1P12107 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.21■□□□□ 0.51
COL11A1P12107 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.21■□□□□ 0.51
COL11A1P12107 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.21■□□□□ 0.51
COL11A1P12107 BNIP3P42-201ENST00000454982 569 ntBASIC18.21■□□□□ 0.51
COL11A1P12107 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL11A1P12107 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.21■□□□□ 0.51
COL11A1P12107 BNIP3P29-201ENST00000598302 571 ntBASIC18.21■□□□□ 0.51
COL11A1P12107 AC011447.5-201ENST00000616168 564 ntBASIC18.21■□□□□ 0.51
COL11A1P12107 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms