Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HMG20BQ9P0W2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMG20BQ9P0W2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMG20BQ9P0W2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HMG20BQ9P0W2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
HMG20BQ9P0W2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.83■□□□□ 0.76
HMG20BQ9P0W2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMG20BQ9P0W2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HMG20BQ9P0W2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMG20BQ9P0W2 AL035456.1-201ENST00000456064 1369 ntBASIC19.83■□□□□ 0.76
HMG20BQ9P0W2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 AC005052.1-201ENST00000625181 2492 ntBASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 TSSK5P-201ENST00000423978 907 ntBASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 INGX-202ENST00000489074 768 ntBASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 AL590560.3-201ENST00000623350 461 ntBASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMG20BQ9P0W2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 MIR661-201ENST00000384842 89 ntBASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 MTND6P24-201ENST00000440466 518 ntBASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 HLA-V-204ENST00000476601 1289 ntBASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 AC100757.3-201ENST00000622361 1406 ntBASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.81■□□□□ 0.76
HMG20BQ9P0W2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 RPL37AP1-201ENST00000412502 279 ntBASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 AC241585.1-201ENST00000433527 519 ntBASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMG20BQ9P0W2 POU5F1P6-201ENST00000466990 990 ntBASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms