Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.89□□□□□ -0.67
LITAFQ99732 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 ZEB1-AS1-208ENST00000607166 2503 ntBASIC10.89□□□□□ -0.67
LITAFQ99732 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.89□□□□□ -0.67
LITAFQ99732 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LITAFQ99732 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.89□□□□□ -0.67
LITAFQ99732 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.88□□□□□ -0.67
LITAFQ99732 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
LITAFQ99732 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC10.88□□□□□ -0.67
LITAFQ99732 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC10.88□□□□□ -0.67
LITAFQ99732 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.88□□□□□ -0.67
LITAFQ99732 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LITAFQ99732 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 BAALC-202ENST00000306391 243 ntTSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 BAALC-204ENST00000330955 222 ntTSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 NABP1-203ENST00000409510 843 ntTSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC10.88□□□□□ -0.67
LITAFQ99732 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 RN7SL606P-201ENST00000472779 293 ntBASIC10.88□□□□□ -0.67
LITAFQ99732 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC10.88□□□□□ -0.67
LITAFQ99732 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC10.88□□□□□ -0.67
LITAFQ99732 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC10.88□□□□□ -0.67
LITAFQ99732 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC10.88□□□□□ -0.67
LITAFQ99732 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC10.88□□□□□ -0.67
LITAFQ99732 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 AL138966.2-201ENST00000621997 464 ntBASIC10.88□□□□□ -0.67
LITAFQ99732 AC005622.1-201ENST00000636801 1703 ntBASIC10.88□□□□□ -0.67
LITAFQ99732 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 AC006504.5-208ENST00000588784 2401 ntBASIC10.88□□□□□ -0.67
LITAFQ99732 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.88□□□□□ -0.67
LITAFQ99732 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.88□□□□□ -0.67
LITAFQ99732 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LITAFQ99732 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 KRT8P44-201ENST00000441609 1350 ntBASIC10.88□□□□□ -0.67
LITAFQ99732 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LITAFQ99732 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.88□□□□□ -0.67
LITAFQ99732 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LITAFQ99732 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC10.87□□□□□ -0.67
LITAFQ99732 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC10.87□□□□□ -0.67
LITAFQ99732 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 UBC-206ENST00000538617 1303 ntTSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC10.87□□□□□ -0.67
LITAFQ99732 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 PMPCAP1-201ENST00000508114 1576 ntBASIC10.87□□□□□ -0.67
LITAFQ99732 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC10.87□□□□□ -0.67
LITAFQ99732 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LITAFQ99732 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC10.87□□□□□ -0.67
LITAFQ99732 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms