Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
USP9XQ93008 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
USP9XQ93008 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
USP9XQ93008 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
USP9XQ93008 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.02□□□□□ -0.16
USP9XQ93008 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
USP9XQ93008 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
USP9XQ93008 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
USP9XQ93008 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.02□□□□□ -0.17
USP9XQ93008 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
USP9XQ93008 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
USP9XQ93008 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
USP9XQ93008 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.02□□□□□ -0.17
USP9XQ93008 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
USP9XQ93008 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.02□□□□□ -0.17
USP9XQ93008 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.02□□□□□ -0.17
USP9XQ93008 VDAC1P7-201ENST00000462417 847 ntBASIC14.02□□□□□ -0.17
USP9XQ93008 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.02□□□□□ -0.17
USP9XQ93008 EEF1DP1-201ENST00000585891 896 ntBASIC14.02□□□□□ -0.17
USP9XQ93008 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.02□□□□□ -0.17
USP9XQ93008 AC091812.3-201ENST00000621362 345 ntBASIC14.02□□□□□ -0.17
USP9XQ93008 AC079336.7-201ENST00000623428 1078 ntBASIC14.02□□□□□ -0.17
USP9XQ93008 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.02□□□□□ -0.17
USP9XQ93008 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
USP9XQ93008 KRT8P39-201ENST00000396270 1433 ntBASIC14.02□□□□□ -0.17
USP9XQ93008 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
USP9XQ93008 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
USP9XQ93008 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
USP9XQ93008 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
USP9XQ93008 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.01□□□□□ -0.17
USP9XQ93008 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.01□□□□□ -0.17
USP9XQ93008 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.01□□□□□ -0.17
USP9XQ93008 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 FO393414.2-201ENST00000405153 598 ntBASIC14.01□□□□□ -0.17
USP9XQ93008 POM121L10P-201ENST00000436994 1285 ntBASIC14.01□□□□□ -0.17
USP9XQ93008 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.01□□□□□ -0.17
USP9XQ93008 MIR4741-201ENST00000579822 90 ntBASIC14.01□□□□□ -0.17
USP9XQ93008 AP001527.2-201ENST00000614441 631 ntBASIC14.01□□□□□ -0.17
USP9XQ93008 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
USP9XQ93008 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.01□□□□□ -0.17
USP9XQ93008 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 PCDHB17P-201ENST00000539533 2393 ntBASIC14.01□□□□□ -0.17
USP9XQ93008 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.01□□□□□ -0.17
USP9XQ93008 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
USP9XQ93008 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.01□□□□□ -0.17
USP9XQ93008 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.01□□□□□ -0.17
USP9XQ93008 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.01□□□□□ -0.17
USP9XQ93008 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.01□□□□□ -0.17
USP9XQ93008 TARDBPP1-201ENST00000442013 1203 ntBASIC14.01□□□□□ -0.17
USP9XQ93008 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.01□□□□□ -0.17
USP9XQ93008 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.01□□□□□ -0.17
USP9XQ93008 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.01□□□□□ -0.17
USP9XQ93008 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
USP9XQ93008 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.01□□□□□ -0.17
USP9XQ93008 FTLP5-201ENST00000586853 534 ntBASIC14.01□□□□□ -0.17
USP9XQ93008 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC14.01□□□□□ -0.17
USP9XQ93008 AC010503.4-201ENST00000615487 688 ntBASIC14.01□□□□□ -0.17
USP9XQ93008 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
USP9XQ93008 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
USP9XQ93008 AL354751.1-201ENST00000412768 1863 ntBASIC14.01□□□□□ -0.17
USP9XQ93008 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
USP9XQ93008 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
USP9XQ93008 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14□□□□□ -0.17
USP9XQ93008 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 REXO1L8P-201ENST00000604378 1897 ntBASIC14□□□□□ -0.17
USP9XQ93008 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
USP9XQ93008 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14□□□□□ -0.17
USP9XQ93008 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
USP9XQ93008 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms