Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CARMIL3Q8ND23 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CARMIL3Q8ND23 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CARMIL3Q8ND23 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.29■□□□□ 0.84
CARMIL3Q8ND23 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.29■□□□□ 0.84
CARMIL3Q8ND23 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CARMIL3Q8ND23 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 AL136982.4-201ENST00000437689 1740 ntBASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CARMIL3Q8ND23 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 AC104596.2-201ENST00000512793 793 ntBASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 MIR4321-201ENST00000592276 80 ntBASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 AC084346.2-201ENST00000607097 949 ntBASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 AL391069.4-201ENST00000609583 481 ntBASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CARMIL3Q8ND23 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CARMIL3Q8ND23 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.27■□□□□ 0.83
CARMIL3Q8ND23 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 AC104989.1-201ENST00000519711 778 ntBASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 AC018665.1-201ENST00000622927 1362 ntBASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CARMIL3Q8ND23 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 350.4 ms