Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.46□□□□□ -0.09
SOX2P48431 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.46□□□□□ -0.09
SOX2P48431 AC091167.2-201ENST00000579581 588 ntBASIC14.46□□□□□ -0.09
SOX2P48431 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.46□□□□□ -0.09
SOX2P48431 AC069148.1-201ENST00000608741 768 ntBASIC14.46□□□□□ -0.09
SOX2P48431 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SOX2P48431 AL139288.1-201ENST00000623748 933 ntBASIC14.46□□□□□ -0.09
SOX2P48431 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SOX2P48431 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SOX2P48431 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
SOX2P48431 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.46□□□□□ -0.09
SOX2P48431 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.46□□□□□ -0.09
SOX2P48431 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.46□□□□□ -0.09
SOX2P48431 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
SOX2P48431 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SOX2P48431 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SOX2P48431 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.46□□□□□ -0.1
SOX2P48431 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.46□□□□□ -0.1
SOX2P48431 AC092850.2-201ENST00000623821 2697 ntBASIC14.46□□□□□ -0.1
SOX2P48431 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SOX2P48431 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.46□□□□□ -0.1
SOX2P48431 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SOX2P48431 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.46□□□□□ -0.1
SOX2P48431 SLC22A20-204ENST00000530038 1673 ntBASIC14.46□□□□□ -0.1
SOX2P48431 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 AC112504.1-201ENST00000623415 1841 ntBASIC14.45□□□□□ -0.1
SOX2P48431 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.45□□□□□ -0.1
SOX2P48431 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SOX2P48431 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SOX2P48431 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 PTCHD3P3-201ENST00000403073 906 ntBASIC14.45□□□□□ -0.1
SOX2P48431 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SOX2P48431 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.45□□□□□ -0.1
SOX2P48431 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.45□□□□□ -0.1
SOX2P48431 AC106795.1-205ENST00000512851 1056 ntBASIC14.45□□□□□ -0.1
SOX2P48431 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.45□□□□□ -0.1
SOX2P48431 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.45□□□□□ -0.1
SOX2P48431 AL732292.2-201ENST00000609649 430 ntBASIC14.45□□□□□ -0.1
SOX2P48431 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SOX2P48431 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.45□□□□□ -0.1
SOX2P48431 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.45□□□□□ -0.1
SOX2P48431 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.45□□□□□ -0.1
SOX2P48431 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SOX2P48431 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
SOX2P48431 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.44□□□□□ -0.1
SOX2P48431 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SOX2P48431 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.44□□□□□ -0.1
SOX2P48431 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.44□□□□□ -0.1
SOX2P48431 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.44□□□□□ -0.1
SOX2P48431 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SOX2P48431 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.44□□□□□ -0.1
SOX2P48431 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.44□□□□□ -0.1
SOX2P48431 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
SOX2P48431 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.44□□□□□ -0.1
SOX2P48431 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.44□□□□□ -0.1
SOX2P48431 AC139887.3-201ENST00000568585 713 ntBASIC14.44□□□□□ -0.1
SOX2P48431 MTDHP3-201ENST00000594186 672 ntBASIC14.44□□□□□ -0.1
SOX2P48431 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.44□□□□□ -0.1
SOX2P48431 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 AP000550.4-202ENST00000639755 178 ntBASIC14.44□□□□□ -0.1
SOX2P48431 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SOX2P48431 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
SOX2P48431 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms