Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA1P17096 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HMGA1P17096 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGA1P17096 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
HMGA1P17096 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HMGA1P17096 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGA1P17096 DGCR5-201ENST00000399539 862 ntBASIC16.81■□□□□ 0.28
HMGA1P17096 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.81■□□□□ 0.28
HMGA1P17096 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.81■□□□□ 0.28
HMGA1P17096 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.81■□□□□ 0.28
HMGA1P17096 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.81■□□□□ 0.28
HMGA1P17096 AC023310.3-201ENST00000557027 670 ntBASIC16.81■□□□□ 0.28
HMGA1P17096 AC100756.1-201ENST00000562736 682 ntBASIC16.81■□□□□ 0.28
HMGA1P17096 AC138749.3-201ENST00000567691 622 ntBASIC16.81■□□□□ 0.28
HMGA1P17096 AC074044.1-201ENST00000609673 707 ntBASIC16.81■□□□□ 0.28
HMGA1P17096 AC116165.1-201ENST00000611806 668 ntBASIC16.81■□□□□ 0.28
HMGA1P17096 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA1P17096 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA1P17096 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
HMGA1P17096 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
HMGA1P17096 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGA1P17096 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGA1P17096 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGA1P17096 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGA1P17096 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HMGA1P17096 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HMGA1P17096 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGA1P17096 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HMGA1P17096 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGA1P17096 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 AC087499.6-201ENST00000411576 835 ntBASIC16.8■□□□□ 0.28
HMGA1P17096 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.8■□□□□ 0.28
HMGA1P17096 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
HMGA1P17096 AC243562.2-201ENST00000561247 970 ntBASIC16.8■□□□□ 0.28
HMGA1P17096 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.8■□□□□ 0.28
HMGA1P17096 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
HMGA1P17096 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.8■□□□□ 0.28
HMGA1P17096 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGA1P17096 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMGA1P17096 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGA1P17096 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
HMGA1P17096 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
HMGA1P17096 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGA1P17096 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMGA1P17096 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HMGA1P17096 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
HMGA1P17096 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGA1P17096 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGA1P17096 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMGA1P17096 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HMGA1P17096 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HMGA1P17096 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGA1P17096 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGA1P17096 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGA1P17096 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA1P17096 AZGP1P1-201ENST00000411909 902 ntBASIC16.79■□□□□ 0.28
HMGA1P17096 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms