Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 YBX2P1-201ENST00000394192 760 ntBASIC15.36■□□□□ 0.05
CLCA1A8K7I4 RPSAP43-201ENST00000402237 625 ntBASIC15.36■□□□□ 0.05
CLCA1A8K7I4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 AC018845.2-201ENST00000568326 409 ntBASIC15.36■□□□□ 0.05
CLCA1A8K7I4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 AC055717.3-201ENST00000622967 595 ntBASIC15.36■□□□□ 0.05
CLCA1A8K7I4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CLCA1A8K7I4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 AC079781.4-201ENST00000641908 219 ntBASIC15.35■□□□□ 0.05
CLCA1A8K7I4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCA1A8K7I4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 IGLL3P-201ENST00000412472 434 ntBASIC15.34■□□□□ 0.05
CLCA1A8K7I4 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.34■□□□□ 0.05
CLCA1A8K7I4 AC004832.2-201ENST00000426397 482 ntBASIC15.34■□□□□ 0.05
CLCA1A8K7I4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 OR7E47P-204ENST00000575924 449 ntBASIC15.34■□□□□ 0.05
CLCA1A8K7I4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.34■□□□□ 0.05
CLCA1A8K7I4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCA1A8K7I4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms