Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.58■□□□□ 0.08
LHX6Q9UPM6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LHX6Q9UPM6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LHX6Q9UPM6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LHX6Q9UPM6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LHX6Q9UPM6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LHX6Q9UPM6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AL022393.1-201ENST00000625142 1677 ntBASIC15.57■□□□□ 0.08
LHX6Q9UPM6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 CICP6-201ENST00000457191 2729 ntBASIC15.57■□□□□ 0.08
LHX6Q9UPM6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 MIR663B-201ENST00000408361 115 ntBASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AC108725.1-201ENST00000495472 409 ntBASIC15.57■□□□□ 0.08
LHX6Q9UPM6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AC112220.4-201ENST00000604982 1263 ntBASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AC024933.1-201ENST00000608472 348 ntBASIC15.57■□□□□ 0.08
LHX6Q9UPM6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 AP000720.1-201ENST00000625091 483 ntBASIC15.57■□□□□ 0.08
LHX6Q9UPM6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 BTBD7P1-201ENST00000447253 1453 ntBASIC15.57■□□□□ 0.08
LHX6Q9UPM6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LHX6Q9UPM6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AC013410.2-201ENST00000422627 201 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 MTATP6P17-201ENST00000431030 672 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 MYCLP2-201ENST00000449268 967 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 MPRIPP1-201ENST00000452433 1089 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 PFN1P12-201ENST00000455938 534 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AC055876.2-201ENST00000531834 546 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AC025423.2-201ENST00000537570 439 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AL158211.1-201ENST00000566763 763 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AC063950.1-202ENST00000600133 568 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AL589739.1-201ENST00000607720 493 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 AL139327.4-201ENST00000612362 153 ntBASIC15.56■□□□□ 0.08
LHX6Q9UPM6 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LHX6Q9UPM6 SLC7A15P-201ENST00000424028 1363 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms