Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 AC105020.1-201ENST00000435356 2205 ntBASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH11YQ9BZA8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 TARDBPP1-201ENST00000442013 1203 ntBASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 FAM86LP-201ENST00000478302 853 ntBASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDH11YQ9BZA8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 KLF2P4-201ENST00000451959 1225 ntBASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 TDH-203ENST00000531764 1110 ntBASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 AL359711.2-201ENST00000563105 872 ntBASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 AL606495.2-201ENST00000605867 535 ntBASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 AL022328.1-201ENST00000610050 478 ntBASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH11YQ9BZA8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 AC124283.3-201ENST00000570869 594 ntBASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDH11YQ9BZA8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms