Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC105020.1-201ENST00000435356 2205 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC020907.1-201ENST00000616460 1350 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 BNIP3P1-202ENST00000550043 1585 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 TUBB1P2-201ENST00000422712 1306 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 TUBB1P1-201ENST00000503144 1300 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC005052.1-201ENST00000625181 2492 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 NME6-203ENST00000415644 849 ntTSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 RNA5SP412-201ENST00000516234 123 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC068587.3-201ENST00000526613 355 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 C2orf69P2-201ENST00000562032 1123 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC036164.1-201ENST00000570544 333 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 MIR3615-201ENST00000581999 87 ntBASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
KRTAP4-1Q9BYQ7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC8.34□□□□□ -1.07
KRTAP4-1Q9BYQ7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms