Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 BNIP3P18-201ENST00000593976 575 ntBASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 Z69720.1-201ENST00000601483 472 ntBASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB3IL1Q8TBN0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAB3IL1Q8TBN0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.39■□□□□ 0.22
RAB3IL1Q8TBN0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAB3IL1Q8TBN0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAB3IL1Q8TBN0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 AC138969.2-201ENST00000532739 9932 ntBASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 RCN1P2-201ENST00000398357 915 ntBASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
RAB3IL1Q8TBN0 AC233702.3-201ENST00000578656 1387 ntBASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 DBET-201ENST00000630918 3363 ntBASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 UPK3BP1-201ENST00000428678 509 ntBASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 MINOS1P3-201ENST00000457048 203 ntBASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 AC096582.2-201ENST00000510860 516 ntBASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 AL121672.3-201ENST00000608644 468 ntBASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 AC091076.1-201ENST00000610741 619 ntBASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 AC114341.1-201ENST00000618070 349 ntBASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IL1Q8TBN0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms