Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 AC006449.5-201ENST00000610658 2098 ntBASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 FAM58DP-201ENST00000428076 619 ntBASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 AL135744.1-201ENST00000565098 629 ntBASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
CCDC33Q8N5R6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
CCDC33Q8N5R6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC33Q8N5R6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC33Q8N5R6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
CCDC33Q8N5R6 AL031731.1-201ENST00000642131 2094 ntBASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AC093214.1-201ENST00000511688 1107 ntBASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 RARRES2P8-201ENST00000566335 367 ntBASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AC091167.2-201ENST00000579581 588 ntBASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AL390955.2-201ENST00000603032 514 ntBASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC33Q8N5R6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms