Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.19□□□□□ -0.62
CSMD3Q7Z407 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 PCDH8P1-201ENST00000428983 2773 ntBASIC11.19□□□□□ -0.62
CSMD3Q7Z407 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.19□□□□□ -0.62
CSMD3Q7Z407 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AC091804.1-201ENST00000486888 567 ntBASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AL359711.2-201ENST00000563105 872 ntBASIC11.19□□□□□ -0.62
CSMD3Q7Z407 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AC133539.2-201ENST00000604757 467 ntBASIC11.19□□□□□ -0.62
CSMD3Q7Z407 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AC004898.1-201ENST00000451057 766 ntBASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 AC016629.1-201ENST00000596579 586 ntBASIC11.19□□□□□ -0.62
CSMD3Q7Z407 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
CSMD3Q7Z407 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 REXO1L8P-201ENST00000604378 1897 ntBASIC11.18□□□□□ -0.62
CSMD3Q7Z407 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 TARDBPP1-201ENST00000442013 1203 ntBASIC11.18□□□□□ -0.62
CSMD3Q7Z407 AL591846.1-201ENST00000451736 433 ntBASIC11.18□□□□□ -0.62
CSMD3Q7Z407 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 AL365330.1-201ENST00000607459 531 ntBASIC11.18□□□□□ -0.62
CSMD3Q7Z407 PRKN-211ENST00000615065 261 ntTSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 AC091046.1-201ENST00000331871 207 ntBASIC11.18□□□□□ -0.62
CSMD3Q7Z407 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 ACTG1P3-201ENST00000431775 1114 ntBASIC11.18□□□□□ -0.62
CSMD3Q7Z407 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 RPS3-201ENST00000278572 907 ntTSL 3 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CSMD3Q7Z407 AC138028.6-201ENST00000616106 1482 ntBASIC11.18□□□□□ -0.62
CSMD3Q7Z407 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
CSMD3Q7Z407 AC005052.1-201ENST00000625181 2492 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms