Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.62□□□□□ -0.39
HIST1H1AQ02539 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HIST1H1AQ02539 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1AQ02539 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HIST1H1AQ02539 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HIST1H1AQ02539 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HIST1H1AQ02539 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.62□□□□□ -0.39
HIST1H1AQ02539 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 FGFR3P6-201ENST00000457012 610 ntBASIC12.61□□□□□ -0.39
HIST1H1AQ02539 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HIST1H1AQ02539 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 AC092364.2-201ENST00000596710 2692 ntBASIC12.6□□□□□ -0.39
HIST1H1AQ02539 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 PI4KAP1-204ENST00000612579 1703 ntBASIC12.6□□□□□ -0.39
HIST1H1AQ02539 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 TSPY19P-201ENST00000418461 509 ntBASIC12.6□□□□□ -0.39
HIST1H1AQ02539 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 TSPY18P-201ENST00000441642 509 ntBASIC12.6□□□□□ -0.39
HIST1H1AQ02539 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H1AQ02539 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms