Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL2P13500 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL2P13500 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL2P13500 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL2P13500 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CCL2P13500 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL2P13500 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL2P13500 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL2P13500 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL2P13500 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL2P13500 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCL2P13500 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL2P13500 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL2P13500 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL2P13500 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL2P13500 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.3□□□□□ -0.12
CCL2P13500 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL2P13500 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL2P13500 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL2P13500 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL2P13500 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL2P13500 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL2P13500 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL2P13500 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCL2P13500 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CCL2P13500 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
CCL2P13500 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.29□□□□□ -0.12
CCL2P13500 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
CCL2P13500 YBX1P5-201ENST00000509441 847 ntBASIC14.29□□□□□ -0.12
CCL2P13500 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 FAM86C2P-203ENST00000528684 1004 ntBASIC14.29□□□□□ -0.12
CCL2P13500 AL596442.2-201ENST00000610240 980 ntBASIC14.29□□□□□ -0.12
CCL2P13500 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 AC134684.3-201ENST00000641758 218 ntBASIC14.29□□□□□ -0.12
CCL2P13500 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL2P13500 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.29□□□□□ -0.12
CCL2P13500 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 REXO1L8P-201ENST00000604378 1897 ntBASIC14.29□□□□□ -0.12
CCL2P13500 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL2P13500 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL2P13500 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CCL2P13500 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL2P13500 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCL2P13500 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 AKAP8P1-201ENST00000434743 1349 ntBASIC14.28□□□□□ -0.12
CCL2P13500 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL2P13500 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.28□□□□□ -0.12
CCL2P13500 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL2P13500 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCL2P13500 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL2P13500 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.28□□□□□ -0.12
CCL2P13500 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL2P13500 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL2P13500 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.28□□□□□ -0.12
CCL2P13500 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.28□□□□□ -0.12
CCL2P13500 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCL2P13500 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms