Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.9□□□□□ -0.34
CUBNO60494 AL359711.2-201ENST00000563105 872 ntBASIC12.9□□□□□ -0.34
CUBNO60494 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.9□□□□□ -0.34
CUBNO60494 AC005702.4-201ENST00000618393 416 ntBASIC12.9□□□□□ -0.34
CUBNO60494 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
CUBNO60494 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CUBNO60494 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CUBNO60494 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CUBNO60494 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CUBNO60494 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
CUBNO60494 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CUBNO60494 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.89□□□□□ -0.35
CUBNO60494 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CUBNO60494 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.89□□□□□ -0.35
CUBNO60494 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CUBNO60494 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CUBNO60494 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 AC009053.2-201ENST00000563701 2365 ntBASIC12.89□□□□□ -0.35
CUBNO60494 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.89□□□□□ -0.35
CUBNO60494 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.89□□□□□ -0.35
CUBNO60494 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.89□□□□□ -0.35
CUBNO60494 AC124283.3-201ENST00000570869 594 ntBASIC12.89□□□□□ -0.35
CUBNO60494 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CUBNO60494 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CUBNO60494 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.89□□□□□ -0.35
CUBNO60494 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.89□□□□□ -0.35
CUBNO60494 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.89□□□□□ -0.35
CUBNO60494 TDH-203ENST00000531764 1110 ntBASIC12.89□□□□□ -0.35
CUBNO60494 TIMM17BP1-201ENST00000545713 516 ntBASIC12.89□□□□□ -0.35
CUBNO60494 KRT90P-201ENST00000549264 1064 ntBASIC12.89□□□□□ -0.35
CUBNO60494 MIR5572-201ENST00000583188 137 ntBASIC12.89□□□□□ -0.35
CUBNO60494 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.89□□□□□ -0.35
CUBNO60494 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CUBNO60494 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.89□□□□□ -0.35
CUBNO60494 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CUBNO60494 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.89□□□□□ -0.35
CUBNO60494 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CUBNO60494 MIR33B-201ENST00000385104 96 ntBASIC12.88□□□□□ -0.35
CUBNO60494 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.88□□□□□ -0.35
CUBNO60494 LDHBP1-201ENST00000455730 1119 ntBASIC12.88□□□□□ -0.35
CUBNO60494 SERBP1P3-201ENST00000459980 809 ntBASIC12.88□□□□□ -0.35
CUBNO60494 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.88□□□□□ -0.35
CUBNO60494 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.88□□□□□ -0.35
CUBNO60494 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.88□□□□□ -0.35
CUBNO60494 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.88□□□□□ -0.35
CUBNO60494 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CUBNO60494 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.88□□□□□ -0.35
CUBNO60494 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.88□□□□□ -0.35
CUBNO60494 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CUBNO60494 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.88□□□□□ -0.35
CUBNO60494 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CUBNO60494 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms