Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A2O43868 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A2O43868 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.84■□□□□ 0.13
SLC28A2O43868 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A2O43868 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A2O43868 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SLC28A2O43868 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.83■□□□□ 0.13
SLC28A2O43868 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
SLC28A2O43868 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SLC28A2O43868 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.83■□□□□ 0.13
SLC28A2O43868 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.83■□□□□ 0.13
SLC28A2O43868 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SLC28A2O43868 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC28A2O43868 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC28A2O43868 KRT17P7-201ENST00000451704 1104 ntBASIC15.83■□□□□ 0.12
SLC28A2O43868 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC28A2O43868 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC28A2O43868 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC28A2O43868 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC28A2O43868 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC28A2O43868 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC28A2O43868 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.83■□□□□ 0.12
SLC28A2O43868 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.83■□□□□ 0.12
SLC28A2O43868 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SLC28A2O43868 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SLC28A2O43868 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.83■□□□□ 0.12
SLC28A2O43868 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SLC28A2O43868 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC28A2O43868 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC28A2O43868 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SLC28A2O43868 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SLC28A2O43868 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 DOC2GP-204ENST00000639052 2548 ntBASIC15.82■□□□□ 0.12
SLC28A2O43868 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 NME2P1-201ENST00000426182 414 ntBASIC15.82■□□□□ 0.12
SLC28A2O43868 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC28A2O43868 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.82■□□□□ 0.12
SLC28A2O43868 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC28A2O43868 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC28A2O43868 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SLC28A2O43868 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC28A2O43868 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC28A2O43868 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SLC28A2O43868 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC28A2O43868 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC28A2O43868 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A2O43868 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A2O43868 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC28A2O43868 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC28A2O43868 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A2O43868 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms