Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ACTN4O43707 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ACTN4O43707 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.37■□□□□ 0.53
ACTN4O43707 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ACTN4O43707 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
ACTN4O43707 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ACTN4O43707 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.36■□□□□ 0.53
ACTN4O43707 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.36■□□□□ 0.53
ACTN4O43707 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.36■□□□□ 0.53
ACTN4O43707 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.36■□□□□ 0.53
ACTN4O43707 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.36■□□□□ 0.53
ACTN4O43707 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.36■□□□□ 0.53
ACTN4O43707 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ACTN4O43707 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.36■□□□□ 0.53
ACTN4O43707 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.36■□□□□ 0.53
ACTN4O43707 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.36■□□□□ 0.53
ACTN4O43707 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.36■□□□□ 0.53
ACTN4O43707 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.36■□□□□ 0.53
ACTN4O43707 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.36■□□□□ 0.53
ACTN4O43707 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ACTN4O43707 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ACTN4O43707 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ACTN4O43707 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
ACTN4O43707 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ACTN4O43707 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.35■□□□□ 0.53
ACTN4O43707 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ACTN4O43707 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.35■□□□□ 0.53
ACTN4O43707 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.35■□□□□ 0.53
ACTN4O43707 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ACTN4O43707 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ACTN4O43707 AC007967.2-201ENST00000432613 625 ntBASIC18.35■□□□□ 0.53
ACTN4O43707 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.35■□□□□ 0.53
ACTN4O43707 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.35■□□□□ 0.53
ACTN4O43707 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.35■□□□□ 0.53
ACTN4O43707 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.35■□□□□ 0.53
ACTN4O43707 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.35■□□□□ 0.53
ACTN4O43707 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.35■□□□□ 0.53
ACTN4O43707 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.35■□□□□ 0.53
ACTN4O43707 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.35■□□□□ 0.53
ACTN4O43707 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ACTN4O43707 AC073439.1-201ENST00000624121 1774 ntBASIC18.35■□□□□ 0.53
ACTN4O43707 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ACTN4O43707 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
ACTN4O43707 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ACTN4O43707 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.34■□□□□ 0.53
ACTN4O43707 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ACTN4O43707 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.34■□□□□ 0.53
ACTN4O43707 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.34■□□□□ 0.53
ACTN4O43707 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 KRT18P34-201ENST00000488218 1270 ntBASIC18.34■□□□□ 0.53
ACTN4O43707 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.34■□□□□ 0.53
ACTN4O43707 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.34■□□□□ 0.53
ACTN4O43707 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.34■□□□□ 0.53
ACTN4O43707 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.34■□□□□ 0.53
ACTN4O43707 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.34■□□□□ 0.53
ACTN4O43707 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.34■□□□□ 0.53
ACTN4O43707 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.34■□□□□ 0.53
ACTN4O43707 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ACTN4O43707 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ACTN4O43707 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms