Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.27■□□□□ 0.84
SRGAP3O43295 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.27■□□□□ 0.84
SRGAP3O43295 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRGAP3O43295 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRGAP3O43295 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRGAP3O43295 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRGAP3O43295 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SRGAP3O43295 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SRGAP3O43295 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SRGAP3O43295 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.26■□□□□ 0.83
SRGAP3O43295 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SRGAP3O43295 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.26■□□□□ 0.83
SRGAP3O43295 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 AL645939.2-201ENST00000427340 991 ntBASIC20.26■□□□□ 0.83
SRGAP3O43295 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.26■□□□□ 0.83
SRGAP3O43295 AC024267.1-201ENST00000582320 895 ntBASIC20.26■□□□□ 0.83
SRGAP3O43295 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.26■□□□□ 0.83
SRGAP3O43295 AC003101.2-201ENST00000612557 442 ntBASIC20.26■□□□□ 0.83
SRGAP3O43295 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.26■□□□□ 0.83
SRGAP3O43295 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.26■□□□□ 0.83
SRGAP3O43295 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SRGAP3O43295 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.26■□□□□ 0.83
SRGAP3O43295 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SRGAP3O43295 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SRGAP3O43295 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SRGAP3O43295 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SRGAP3O43295 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SRGAP3O43295 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SRGAP3O43295 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.25■□□□□ 0.83
SRGAP3O43295 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.25■□□□□ 0.83
SRGAP3O43295 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SRGAP3O43295 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.25■□□□□ 0.83
SRGAP3O43295 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.25■□□□□ 0.83
SRGAP3O43295 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 CNN2P2-201ENST00000443536 909 ntBASIC20.25■□□□□ 0.83
SRGAP3O43295 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 CNN2P3-201ENST00000450201 906 ntBASIC20.25■□□□□ 0.83
SRGAP3O43295 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.25■□□□□ 0.83
SRGAP3O43295 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.25■□□□□ 0.83
SRGAP3O43295 AC015911.4-201ENST00000588022 1070 ntBASIC20.25■□□□□ 0.83
SRGAP3O43295 MIR4321-201ENST00000592276 80 ntBASIC20.25■□□□□ 0.83
SRGAP3O43295 AL365330.1-201ENST00000607459 531 ntBASIC20.25■□□□□ 0.83
SRGAP3O43295 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
SRGAP3O43295 AL136317.3-201ENST00000618497 906 ntBASIC20.25■□□□□ 0.83
SRGAP3O43295 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SRGAP3O43295 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.25■□□□□ 0.83
SRGAP3O43295 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SRGAP3O43295 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SRGAP3O43295 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.25■□□□□ 0.83
SRGAP3O43295 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SRGAP3O43295 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.25■□□□□ 0.83
SRGAP3O43295 TUBB3P1-201ENST00000405796 1332 ntBASIC20.25■□□□□ 0.83
SRGAP3O43295 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.25■□□□□ 0.83
SRGAP3O43295 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRGAP3O43295 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.24■□□□□ 0.83
SRGAP3O43295 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.24■□□□□ 0.83
SRGAP3O43295 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.24■□□□□ 0.83
SRGAP3O43295 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SRGAP3O43295 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.24■□□□□ 0.83
SRGAP3O43295 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.24■□□□□ 0.83
SRGAP3O43295 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.24■□□□□ 0.83
SRGAP3O43295 RFPL4AP1-201ENST00000530883 850 ntBASIC20.24■□□□□ 0.83
SRGAP3O43295 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SRGAP3O43295 AC106028.4-201ENST00000614509 607 ntBASIC20.24■□□□□ 0.83
SRGAP3O43295 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SRGAP3O43295 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRGAP3O43295 AC124067.4-201ENST00000519691 2379 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms