Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HPS5Q9UPZ3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HPS5Q9UPZ3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HPS5Q9UPZ3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HPS5Q9UPZ3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 AC092552.1-201ENST00000547243 906 ntBASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 AC106886.1-201ENST00000568660 600 ntBASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 AC132938.2-201ENST00000579188 680 ntBASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 AL031055.1-201ENST00000606362 631 ntBASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 AL591163.1-201ENST00000641757 987 ntBASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HPS5Q9UPZ3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 FAM86MP-201ENST00000340703 885 ntBASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 AL353779.1-201ENST00000434793 351 ntBASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 REXO1L6P-201ENST00000603433 1515 ntBASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS5Q9UPZ3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 RN7SL752P-201ENST00000463779 287 ntBASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 MIR3909-201ENST00000579518 119 ntBASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.43■□□□□ 0.7
HPS5Q9UPZ3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms