Protein–RNA interactions for Protein: Q9P2K3

RCOR3, REST corepressor 3, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3Q9P2K3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 FOXO1B-201ENST00000504678 1527 ntBASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 AC142381.1-201ENST00000426099 345 ntBASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 SPDYE11-202ENST00000450699 704 ntBASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 SPDYE9P-201ENST00000570642 692 ntBASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 AC024267.1-201ENST00000582320 895 ntBASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 SPDYE10P-202ENST00000612005 668 ntBASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 SPDYE8P-202ENST00000612377 668 ntBASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 AC139530.3-201ENST00000620344 690 ntBASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RCOR3Q9P2K3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 MIR346-201ENST00000362234 95 ntBASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 LINC01225-203ENST00000563550 1244 ntBASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 AC084121.4-201ENST00000641598 221 ntBASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 AF228730.8-201ENST00000642140 221 ntBASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 AC112504.1-201ENST00000623415 1841 ntBASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RCOR3Q9P2K3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.8■□□□□ 0.28
RCOR3Q9P2K3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RCOR3Q9P2K3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.8■□□□□ 0.28
RCOR3Q9P2K3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RCOR3Q9P2K3 ELL2P1-201ENST00000413990 1906 ntBASIC16.8■□□□□ 0.28
RCOR3Q9P2K3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RCOR3Q9P2K3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.8■□□□□ 0.28
RCOR3Q9P2K3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RCOR3Q9P2K3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms