Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 RNU4-92P-201ENST00000363783 136 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 Y_RNA.356-201ENST00000365475 113 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 Y_RNA.401-201ENST00000383965 117 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 SNORA26.8-201ENST00000391306 124 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AP000692.1-201ENST00000397184 596 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC003045.1-201ENST00000398779 713 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AL449283.1-202ENST00000418249 604 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC009501.2-201ENST00000428700 312 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AL050321.1-201ENST00000432363 400 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC147651.2-201ENST00000434541 420 ntTSL 3 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 FABP5P3-201ENST00000437960 408 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 USP9YP12-201ENST00000450481 570 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 OR2I1P-207ENST00000453522 948 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC00945-201ENST00000453716 753 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC021006.1-201ENST00000489849 553 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC004069.2-201ENST00000505438 1114 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 UNC93B8-201ENST00000511903 705 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 LYPLA1P2-201ENST00000513113 691 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 DCAF13-203ENST00000519682 837 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC100818.1-202ENST00000523748 578 ntTSL 4 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 OR4A13P-201ENST00000529316 942 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC011611.5-201ENST00000552477 578 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AL445383.1-201ENST00000554689 874 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 CKS1BP1-201ENST00000555221 240 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 HNRNPCP1-201ENST00000556181 766 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 C2orf69P3-201ENST00000565542 1120 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC021483.2-201ENST00000567415 758 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 MIR3181-201ENST00000578512 73 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 ZNF880-206ENST00000600321 953 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC008555.5-201ENST00000603718 515 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC099791.2-201ENST00000605725 427 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC010503.4-201ENST00000615487 688 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 HMGB1P24-202ENST00000615653 685 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC245389.2-201ENST00000616023 576 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC009233.1-201ENST00000616477 371 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC242843.1-201ENST00000618702 573 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 Metazoa_SRP.205-201ENST00000620071 267 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC093875.1-201ENST00000623688 504 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 ATE1-AS1-202ENST00000636460 506 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AL356488.3-201ENST00000608574 2888 ntBASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC10.41□□□□□ -0.74
KRTAP3-3Q9BYR6 IL7-202ENST00000379113 1888 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 ST8SIA6-AS1-201ENST00000377597 1811 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 PSMC1P4-201ENST00000515236 1327 ntBASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 NCALD-225ENST00000522951 1315 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 FGG-204ENST00000405164 1539 ntTSL 5 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 MT1B-201ENST00000334346 380 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
KRTAP3-3Q9BYR6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms