Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 AL671277.1-201ENST00000429656 993 ntBASIC19.04■□□□□ 0.64
PGBD1Q96JS3 TIMM8BP1-201ENST00000452384 211 ntBASIC19.04■□□□□ 0.64
PGBD1Q96JS3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PGBD1Q96JS3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 AC109635.5-201ENST00000533593 962 ntBASIC19.03■□□□□ 0.64
PGBD1Q96JS3 AL135744.1-201ENST00000565098 629 ntBASIC19.03■□□□□ 0.64
PGBD1Q96JS3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 REXO1L8P-201ENST00000604378 1897 ntBASIC19.03■□□□□ 0.64
PGBD1Q96JS3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.03■□□□□ 0.64
PGBD1Q96JS3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.02■□□□□ 0.64
PGBD1Q96JS3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PGBD1Q96JS3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.02■□□□□ 0.63
PGBD1Q96JS3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms