Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 AC027307.3-201ENST00000594262 1100 ntBASIC17.72■□□□□ 0.43
PGBD4Q96DM1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PGBD4Q96DM1 AL603756.1-201ENST00000606511 2163 ntBASIC17.72■□□□□ 0.43
PGBD4Q96DM1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 PIN1P1-201ENST00000412108 996 ntBASIC17.71■□□□□ 0.43
PGBD4Q96DM1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 AC009477.1-201ENST00000452936 217 ntBASIC17.71■□□□□ 0.43
PGBD4Q96DM1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 AC004233.3-201ENST00000607794 1269 ntBASIC17.71■□□□□ 0.43
PGBD4Q96DM1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PGBD4Q96DM1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PGBD4Q96DM1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PGBD4Q96DM1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 PCGF3-213ENST00000620529 1899 ntBASIC17.7■□□□□ 0.42
PGBD4Q96DM1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 AC061975.2-201ENST00000581722 295 ntBASIC17.7■□□□□ 0.42
PGBD4Q96DM1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PGBD4Q96DM1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PGBD4Q96DM1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms