Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 AC005052.1-201ENST00000625181 2492 ntBASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 AL353705.2-201ENST00000428243 662 ntBASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 CYMP-203ENST00000474680 1263 ntBASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 AC125807.1-201ENST00000483097 614 ntBASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 MIR4453-201ENST00000584019 89 ntBASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 AL365330.1-201ENST00000607459 531 ntBASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRRTM4Q86VH4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 KLF2P3-201ENST00000451977 1087 ntBASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 AC051619.7-201ENST00000568314 623 ntBASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 PCDHA14-201ENST00000506751 2298 ntBASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRTM4Q86VH4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
LRRTM4Q86VH4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms