Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.19■□□□□ 0.66
RHBDL3P58872 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDL3P58872 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RHBDL3P58872 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.19■□□□□ 0.66
RHBDL3P58872 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDL3P58872 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDL3P58872 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 Z97205.2-201ENST00000564697 1639 ntBASIC19.18■□□□□ 0.66
RHBDL3P58872 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.18■□□□□ 0.66
RHBDL3P58872 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RHBDL3P58872 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 AZGP1P1-201ENST00000411909 902 ntBASIC19.18■□□□□ 0.66
RHBDL3P58872 AC098850.1-201ENST00000419919 790 ntBASIC19.18■□□□□ 0.66
RHBDL3P58872 U91328.1-201ENST00000437528 223 ntBASIC19.18■□□□□ 0.66
RHBDL3P58872 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RHBDL3P58872 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 AC007431.3-201ENST00000623221 587 ntBASIC19.18■□□□□ 0.66
RHBDL3P58872 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.18■□□□□ 0.66
RHBDL3P58872 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RHBDL3P58872 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RHBDL3P58872 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
RHBDL3P58872 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RHBDL3P58872 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RHBDL3P58872 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDL3P58872 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDL3P58872 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.17■□□□□ 0.66
RHBDL3P58872 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
RHBDL3P58872 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
RHBDL3P58872 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RHBDL3P58872 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
RHBDL3P58872 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.17■□□□□ 0.66
RHBDL3P58872 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RHBDL3P58872 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.17■□□□□ 0.66
RHBDL3P58872 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RHBDL3P58872 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.17■□□□□ 0.66
RHBDL3P58872 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
RHBDL3P58872 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.17■□□□□ 0.66
RHBDL3P58872 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RHBDL3P58872 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.17■□□□□ 0.66
RHBDL3P58872 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RHBDL3P58872 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RHBDL3P58872 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RHBDL3P58872 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.17■□□□□ 0.66
RHBDL3P58872 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDL3P58872 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RHBDL3P58872 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDL3P58872 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDL3P58872 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDL3P58872 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RHBDL3P58872 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDL3P58872 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.16■□□□□ 0.66
RHBDL3P58872 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.16■□□□□ 0.66
RHBDL3P58872 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.16■□□□□ 0.66
RHBDL3P58872 INE1-201ENST00000456273 945 ntBASIC19.16■□□□□ 0.66
RHBDL3P58872 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.16■□□□□ 0.66
RHBDL3P58872 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.16■□□□□ 0.66
RHBDL3P58872 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.16■□□□□ 0.66
RHBDL3P58872 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms