Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
SMARCA4P51532 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC28.71■■■□□ 2.19
SMARCA4P51532 AC026410.3-201ENST00000514280 936 ntBASIC28.71■■■□□ 2.19
SMARCA4P51532 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC28.71■■■□□ 2.19
SMARCA4P51532 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC28.71■■■□□ 2.19
SMARCA4P51532 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SMARCA4P51532 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC28.71■■■□□ 2.19
SMARCA4P51532 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC28.71■■■□□ 2.19
SMARCA4P51532 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
SMARCA4P51532 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC28.71■■■□□ 2.19
SMARCA4P51532 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SMARCA4P51532 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMARCA4P51532 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
SMARCA4P51532 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SMARCA4P51532 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SMARCA4P51532 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SMARCA4P51532 GUK1-206ENST00000366723 845 ntTSL 5 BASIC28.7■■■□□ 2.19
SMARCA4P51532 PFN2-215ENST00000497148 743 ntTSL 4 BASIC28.7■■■□□ 2.19
SMARCA4P51532 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC28.7■■■□□ 2.19
SMARCA4P51532 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC28.7■■■□□ 2.19
SMARCA4P51532 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC28.7■■■□□ 2.19
SMARCA4P51532 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC28.7■■■□□ 2.18
SMARCA4P51532 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC28.7■■■□□ 2.18
SMARCA4P51532 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
SMARCA4P51532 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC28.7■■■□□ 2.18
SMARCA4P51532 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC28.69■■■□□ 2.18
SMARCA4P51532 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCA4P51532 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
SMARCA4P51532 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC28.69■■■□□ 2.18
SMARCA4P51532 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC28.69■■■□□ 2.18
SMARCA4P51532 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCA4P51532 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
SMARCA4P51532 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC28.69■■■□□ 2.18
SMARCA4P51532 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCA4P51532 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCA4P51532 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
SMARCA4P51532 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCA4P51532 ZBTB45P2-201ENST00000452245 1531 ntBASIC28.69■■■□□ 2.18
SMARCA4P51532 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCA4P51532 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCA4P51532 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC28.69■■■□□ 2.18
SMARCA4P51532 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCA4P51532 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SMARCA4P51532 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC28.69■■■□□ 2.18
SMARCA4P51532 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC28.69■■■□□ 2.18
SMARCA4P51532 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC28.69■■■□□ 2.18
SMARCA4P51532 AC091271.1-201ENST00000611877 1162 ntBASIC28.69■■■□□ 2.18
SMARCA4P51532 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
SMARCA4P51532 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SMARCA4P51532 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC28.68■■■□□ 2.18
SMARCA4P51532 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SMARCA4P51532 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC28.68■■■□□ 2.18
SMARCA4P51532 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
SMARCA4P51532 ELK2AP-201ENST00000392510 1007 ntBASIC28.68■■■□□ 2.18
SMARCA4P51532 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC28.68■■■□□ 2.18
SMARCA4P51532 Z93015.1-201ENST00000451718 390 ntBASIC28.68■■■□□ 2.18
SMARCA4P51532 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SMARCA4P51532 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC28.68■■■□□ 2.18
SMARCA4P51532 HNRNPA1P48-202ENST00000565308 961 ntBASIC28.68■■■□□ 2.18
SMARCA4P51532 IFT20-206ENST00000578122 834 ntTSL 2 BASIC28.68■■■□□ 2.18
SMARCA4P51532 IFT20-208ENST00000578985 831 ntTSL 3 BASIC28.68■■■□□ 2.18
SMARCA4P51532 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC28.68■■■□□ 2.18
SMARCA4P51532 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA4P51532 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC28.67■■■□□ 2.18
SMARCA4P51532 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA4P51532 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCA4P51532 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCA4P51532 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA4P51532 MIR663B-201ENST00000408361 115 ntBASIC28.67■■■□□ 2.18
SMARCA4P51532 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC28.67■■■□□ 2.18
SMARCA4P51532 OARD1-212ENST00000482515 832 ntTSL 2 BASIC28.67■■■□□ 2.18
SMARCA4P51532 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC28.67■■■□□ 2.18
SMARCA4P51532 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA4P51532 RETN-203ENST00000629642 400 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCA4P51532 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA4P51532 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC28.67■■■□□ 2.18
SMARCA4P51532 GRN-222ENST00000639447 1314 ntTSL 2 BASIC28.67■■■□□ 2.18
SMARCA4P51532 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA4P51532 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCA4P51532 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA4P51532 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA4P51532 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA4P51532 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC28.66■■■□□ 2.18
SMARCA4P51532 MTX1P1-201ENST00000440904 838 ntBASIC28.66■■■□□ 2.18
SMARCA4P51532 AC104306.2-201ENST00000451877 341 ntBASIC28.66■■■□□ 2.18
SMARCA4P51532 AL590640.2-201ENST00000457038 527 ntBASIC28.66■■■□□ 2.18
SMARCA4P51532 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC28.66■■■□□ 2.18
SMARCA4P51532 AC097359.3-201ENST00000603982 1210 ntBASIC28.66■■■□□ 2.18
SMARCA4P51532 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC28.66■■■□□ 2.18
SMARCA4P51532 EML3-217ENST00000531557 2509 ntTSL 5 BASIC28.66■■■□□ 2.18
SMARCA4P51532 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC28.66■■■□□ 2.18
SMARCA4P51532 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA4P51532 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC28.66■■■□□ 2.18
SMARCA4P51532 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA4P51532 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
SMARCA4P51532 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC28.66■■■□□ 2.18
SMARCA4P51532 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 AL591846.1-201ENST00000451736 433 ntBASIC28.65■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms