Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AC040169.1-201ENST00000565382 521 ntBASIC19.73■□□□□ 0.75
CHMLP26374 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMLP26374 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMLP26374 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMLP26374 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.73■□□□□ 0.75
CHMLP26374 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHMLP26374 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CHMLP26374 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
CHMLP26374 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHMLP26374 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMLP26374 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.72■□□□□ 0.75
CHMLP26374 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.72■□□□□ 0.75
CHMLP26374 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMLP26374 AL671277.1-201ENST00000429656 993 ntBASIC19.72■□□□□ 0.75
CHMLP26374 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CHMLP26374 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CHMLP26374 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 AKAP8P1-201ENST00000434743 1349 ntBASIC19.72■□□□□ 0.75
CHMLP26374 PMS2P7-201ENST00000506558 1336 ntBASIC19.72■□□□□ 0.75
CHMLP26374 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMLP26374 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMLP26374 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMLP26374 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CHMLP26374 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.71■□□□□ 0.75
CHMLP26374 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.71■□□□□ 0.75
CHMLP26374 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHMLP26374 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CHMLP26374 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 AC105917.1-201ENST00000506637 2539 ntBASIC19.71■□□□□ 0.75
CHMLP26374 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 AP005117.1-202ENST00000581724 1908 ntBASIC19.71■□□□□ 0.75
CHMLP26374 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHMLP26374 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.71■□□□□ 0.75
CHMLP26374 TFAMP1-201ENST00000412727 736 ntBASIC19.71■□□□□ 0.75
CHMLP26374 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.71■□□□□ 0.75
CHMLP26374 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 AL135744.1-201ENST00000565098 629 ntBASIC19.71■□□□□ 0.75
CHMLP26374 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.71■□□□□ 0.75
CHMLP26374 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHMLP26374 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.71■□□□□ 0.75
CHMLP26374 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMLP26374 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.71■□□□□ 0.75
CHMLP26374 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 AL162727.3-201ENST00000635661 2787 ntBASIC19.71■□□□□ 0.75
CHMLP26374 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
CHMLP26374 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
CHMLP26374 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHMLP26374 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.7■□□□□ 0.74
CHMLP26374 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMLP26374 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHMLP26374 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMLP26374 GPX1P2-201ENST00000429271 606 ntBASIC19.7■□□□□ 0.74
CHMLP26374 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.7■□□□□ 0.74
CHMLP26374 AC243562.1-201ENST00000560672 389 ntBASIC19.7■□□□□ 0.74
CHMLP26374 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHMLP26374 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.7■□□□□ 0.74
CHMLP26374 AL365330.1-201ENST00000607459 531 ntBASIC19.7■□□□□ 0.74
CHMLP26374 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms