Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.21■□□□□ 0.35
MMP8P22894 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MMP8P22894 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
MMP8P22894 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
MMP8P22894 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.21■□□□□ 0.34
MMP8P22894 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
MMP8P22894 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.2■□□□□ 0.34
MMP8P22894 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP8P22894 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP8P22894 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP8P22894 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.2■□□□□ 0.34
MMP8P22894 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.2■□□□□ 0.34
MMP8P22894 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 AC245100.5-201ENST00000452108 331 ntBASIC17.2■□□□□ 0.34
MMP8P22894 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP8P22894 RN7SL589P-201ENST00000481268 310 ntBASIC17.2■□□□□ 0.34
MMP8P22894 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.2■□□□□ 0.34
MMP8P22894 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.2■□□□□ 0.34
MMP8P22894 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.2■□□□□ 0.34
MMP8P22894 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.2■□□□□ 0.34
MMP8P22894 MIR4321-201ENST00000592276 80 ntBASIC17.2■□□□□ 0.34
MMP8P22894 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MMP8P22894 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.2■□□□□ 0.34
MMP8P22894 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MMP8P22894 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP8P22894 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
MMP8P22894 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
MMP8P22894 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.19■□□□□ 0.34
MMP8P22894 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 HTR5BP-201ENST00000430851 1154 ntBASIC17.19■□□□□ 0.34
MMP8P22894 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.19■□□□□ 0.34
MMP8P22894 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.19■□□□□ 0.34
MMP8P22894 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.19■□□□□ 0.34
MMP8P22894 AC098859.1-201ENST00000502915 1238 ntBASIC17.19■□□□□ 0.34
MMP8P22894 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.19■□□□□ 0.34
MMP8P22894 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 LINC01225-203ENST00000563550 1244 ntBASIC17.19■□□□□ 0.34
MMP8P22894 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 AC027307.2-201ENST00000591252 911 ntBASIC17.19■□□□□ 0.34
MMP8P22894 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.19■□□□□ 0.34
MMP8P22894 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 AC026120.1-201ENST00000611536 926 ntBASIC17.19■□□□□ 0.34
MMP8P22894 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
MMP8P22894 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP8P22894 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP8P22894 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms