Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.53□□□□□ -0.08
MSR1P21757 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.53□□□□□ -0.08
MSR1P21757 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MSR1P21757 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MSR1P21757 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MSR1P21757 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MSR1P21757 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MSR1P21757 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MSR1P21757 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.53□□□□□ -0.08
MSR1P21757 AL391005.1-201ENST00000623953 2435 ntBASIC14.53□□□□□ -0.08
MSR1P21757 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MSR1P21757 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MSR1P21757 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MSR1P21757 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MSR1P21757 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MSR1P21757 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
MSR1P21757 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MSR1P21757 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
MSR1P21757 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MSR1P21757 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.52□□□□□ -0.08
MSR1P21757 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MSR1P21757 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MSR1P21757 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.52□□□□□ -0.08
MSR1P21757 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MSR1P21757 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MSR1P21757 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MSR1P21757 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MSR1P21757 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MSR1P21757 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
MSR1P21757 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.52□□□□□ -0.08
MSR1P21757 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.52□□□□□ -0.08
MSR1P21757 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
MSR1P21757 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MSR1P21757 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
MSR1P21757 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.52□□□□□ -0.09
MSR1P21757 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
MSR1P21757 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.52□□□□□ -0.09
MSR1P21757 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.52□□□□□ -0.09
MSR1P21757 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 KRT18P34-201ENST00000488218 1270 ntBASIC14.52□□□□□ -0.09
MSR1P21757 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.52□□□□□ -0.09
MSR1P21757 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.52□□□□□ -0.09
MSR1P21757 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
MSR1P21757 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.52□□□□□ -0.09
MSR1P21757 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 FAM197Y3-203ENST00000618346 717 ntBASIC14.52□□□□□ -0.09
MSR1P21757 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
MSR1P21757 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
MSR1P21757 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
MSR1P21757 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.52□□□□□ -0.09
MSR1P21757 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.52□□□□□ -0.09
MSR1P21757 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.52□□□□□ -0.09
MSR1P21757 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MSR1P21757 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.51□□□□□ -0.09
MSR1P21757 AL596087.1-201ENST00000400979 1969 ntBASIC14.51□□□□□ -0.09
MSR1P21757 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MSR1P21757 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MSR1P21757 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.51□□□□□ -0.09
MSR1P21757 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MSR1P21757 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MSR1P21757 AC018695.7-201ENST00000624587 2492 ntBASIC14.51□□□□□ -0.09
MSR1P21757 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
MSR1P21757 REXO1L8P-201ENST00000604378 1897 ntBASIC14.51□□□□□ -0.09
MSR1P21757 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.51□□□□□ -0.09
MSR1P21757 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MSR1P21757 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MSR1P21757 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
MSR1P21757 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MSR1P21757 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MSR1P21757 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MSR1P21757 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
MSR1P21757 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MSR1P21757 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.51□□□□□ -0.09
MSR1P21757 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.51□□□□□ -0.09
MSR1P21757 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MSR1P21757 KRT18P3-201ENST00000451602 1288 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms