Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 AC068587.6-202ENST00000641839 5619 ntBASIC16.55■□□□□ 0.24
HLA-DPA1P20036 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 MKNK2P1-201ENST00000437526 628 ntBASIC16.55■□□□□ 0.24
HLA-DPA1P20036 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 PRYP6-201ENST00000514804 343 ntBASIC16.55■□□□□ 0.24
HLA-DPA1P20036 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DPA1P20036 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 AL671277.1-201ENST00000429656 993 ntBASIC16.54■□□□□ 0.24
HLA-DPA1P20036 DNAJB3-201ENST00000446806 729 ntBASIC16.54■□□□□ 0.24
HLA-DPA1P20036 RN7SL589P-201ENST00000481268 310 ntBASIC16.54■□□□□ 0.24
HLA-DPA1P20036 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 AC023511.2-201ENST00000618803 211 ntBASIC16.54■□□□□ 0.24
HLA-DPA1P20036 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 PCDH8P1-201ENST00000428983 2773 ntBASIC16.54■□□□□ 0.24
HLA-DPA1P20036 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DPA1P20036 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DPA1P20036 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPA1P20036 AL513523.2-202ENST00000427283 2040 ntBASIC16.53■□□□□ 0.24
HLA-DPA1P20036 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPA1P20036 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPA1P20036 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPA1P20036 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DPA1P20036 AL596087.1-201ENST00000400979 1969 ntBASIC16.53■□□□□ 0.24
HLA-DPA1P20036 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HLA-DPA1P20036 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DPA1P20036 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPA1P20036 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DPA1P20036 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms