Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC011495.1-201ENST00000498085 584 ntBASIC18.33■□□□□ 0.52
COL11A1P12107 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL11A1P12107 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.32■□□□□ 0.52
COL11A1P12107 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.32■□□□□ 0.52
COL11A1P12107 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.32■□□□□ 0.52
COL11A1P12107 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
COL11A1P12107 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.32■□□□□ 0.52
COL11A1P12107 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.32■□□□□ 0.52
COL11A1P12107 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL11A1P12107 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.32■□□□□ 0.52
COL11A1P12107 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.32■□□□□ 0.52
COL11A1P12107 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL11A1P12107 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL11A1P12107 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL11A1P12107 RN7SL399P-201ENST00000471648 279 ntBASIC18.32■□□□□ 0.52
COL11A1P12107 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL11A1P12107 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL11A1P12107 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.32■□□□□ 0.52
COL11A1P12107 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.32■□□□□ 0.52
COL11A1P12107 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
COL11A1P12107 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
COL11A1P12107 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.32■□□□□ 0.52
COL11A1P12107 AC124283.3-201ENST00000570869 594 ntBASIC18.32■□□□□ 0.52
COL11A1P12107 GNRHR2-203ENST00000581100 1187 ntBASIC18.32■□□□□ 0.52
COL11A1P12107 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL11A1P12107 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.32■□□□□ 0.52
COL11A1P12107 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL11A1P12107 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL11A1P12107 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL11A1P12107 AC134407.2-201ENST00000625089 1978 ntBASIC18.32■□□□□ 0.52
COL11A1P12107 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.32■□□□□ 0.52
COL11A1P12107 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
COL11A1P12107 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.31■□□□□ 0.52
COL11A1P12107 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL11A1P12107 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 AL442647.2-201ENST00000429864 857 ntBASIC18.31■□□□□ 0.52
COL11A1P12107 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.31■□□□□ 0.52
COL11A1P12107 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.31■□□□□ 0.52
COL11A1P12107 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL11A1P12107 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.31■□□□□ 0.52
COL11A1P12107 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.31■□□□□ 0.52
COL11A1P12107 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.31■□□□□ 0.52
COL11A1P12107 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.31■□□□□ 0.52
COL11A1P12107 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.31■□□□□ 0.52
COL11A1P12107 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.31■□□□□ 0.52
COL11A1P12107 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.31■□□□□ 0.52
COL11A1P12107 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL11A1P12107 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
COL11A1P12107 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.31■□□□□ 0.52
COL11A1P12107 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
COL11A1P12107 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
COL11A1P12107 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL11A1P12107 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL11A1P12107 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL11A1P12107 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL11A1P12107 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.3■□□□□ 0.52
COL11A1P12107 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL11A1P12107 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL11A1P12107 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.3■□□□□ 0.52
COL11A1P12107 AC074338.1-201ENST00000416825 156 ntBASIC18.3■□□□□ 0.52
COL11A1P12107 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.3■□□□□ 0.52
COL11A1P12107 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL11A1P12107 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.3■□□□□ 0.52
COL11A1P12107 MIR5189-201ENST00000577370 114 ntBASIC18.3■□□□□ 0.52
COL11A1P12107 AC015936.2-201ENST00000593177 259 ntBASIC18.3■□□□□ 0.52
COL11A1P12107 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.3■□□□□ 0.52
COL11A1P12107 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
COL11A1P12107 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL11A1P12107 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL11A1P12107 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL11A1P12107 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.3■□□□□ 0.52
COL11A1P12107 INTS4P2-202ENST00000614726 2019 ntBASIC18.3■□□□□ 0.52
COL11A1P12107 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL11A1P12107 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL11A1P12107 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.3■□□□□ 0.52
COL11A1P12107 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COL11A1P12107 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.3■□□□□ 0.52
COL11A1P12107 MEP1AP4-201ENST00000423244 1087 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms