Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PCDHB7Q9Y5E2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 MYCLP2-201ENST00000449268 967 ntBASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 WASH4P-201ENST00000564273 1246 ntBASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 AL365330.1-201ENST00000607459 531 ntBASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 LINC01144-201ENST00000626198 1710 ntBASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB7Q9Y5E2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 U82695.1-201ENST00000635752 1889 ntBASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHB7Q9Y5E2 AC023310.3-201ENST00000557027 670 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms