Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Chaf1bQ9D0N7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Chaf1bQ9D0N7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Chaf1bQ9D0N7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Gm45612-201ENSMUST00000211320 160 ntBASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chaf1bQ9D0N7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chaf1bQ9D0N7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.56□□□□□ -0.4
Chaf1bQ9D0N7 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms