Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBE2OQ9C0C9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 KLF2P4-201ENST00000451959 1225 ntBASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 RNA5SP410-201ENST00000516285 106 ntBASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UBE2OQ9C0C9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 SERBP1P3-201ENST00000459980 809 ntBASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 AC108725.1-201ENST00000495472 409 ntBASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 RHOQP1-201ENST00000555758 579 ntBASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 AC131009.4-201ENST00000624048 1740 ntBASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UBE2OQ9C0C9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 AC093525.8-201ENST00000624099 1342 ntBASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 MIR3615-201ENST00000581999 87 ntBASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 AC004461.2-201ENST00000629517 803 ntBASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.02■□□□□ 0.48
UBE2OQ9C0C9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms