Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNED1Q8TER0 AC099548.2-209ENST00000480264 625 ntBASIC19.68■□□□□ 0.74
SNED1Q8TER0 TIMM17BP1-201ENST00000545713 516 ntBASIC19.68■□□□□ 0.74
SNED1Q8TER0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.68■□□□□ 0.74
SNED1Q8TER0 CU634019.7-201ENST00000624153 1185 ntBASIC19.68■□□□□ 0.74
SNED1Q8TER0 FP236241.2-201ENST00000624906 1185 ntBASIC19.68■□□□□ 0.74
SNED1Q8TER0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 BCYRN1-201ENST00000418539 200 ntBASIC19.67■□□□□ 0.74
SNED1Q8TER0 RPL7P3-201ENST00000441388 714 ntBASIC19.67■□□□□ 0.74
SNED1Q8TER0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 AC244093.1-201ENST00000610837 814 ntBASIC19.67■□□□□ 0.74
SNED1Q8TER0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SNED1Q8TER0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNED1Q8TER0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 KRT8P22-201ENST00000562317 1415 ntBASIC19.66■□□□□ 0.74
SNED1Q8TER0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 AP001889.1-201ENST00000525414 633 ntBASIC19.66■□□□□ 0.74
SNED1Q8TER0 AL359711.2-201ENST00000563105 872 ntBASIC19.66■□□□□ 0.74
SNED1Q8TER0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNED1Q8TER0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNED1Q8TER0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNED1Q8TER0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNED1Q8TER0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNED1Q8TER0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNED1Q8TER0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNED1Q8TER0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNED1Q8TER0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 AC068587.3-201ENST00000526613 355 ntBASIC19.65■□□□□ 0.74
SNED1Q8TER0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 AL365330.1-201ENST00000607459 531 ntBASIC19.65■□□□□ 0.74
SNED1Q8TER0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNED1Q8TER0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNED1Q8TER0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.65■□□□□ 0.74
SNED1Q8TER0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms