Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.43■□□□□ 0.22
CHD5Q8TDI0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.43■□□□□ 0.22
CHD5Q8TDI0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 AL603832.2-201ENST00000566195 2125 ntBASIC16.43■□□□□ 0.22
CHD5Q8TDI0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 AL390754.1-201ENST00000619088 582 ntBASIC16.43■□□□□ 0.22
CHD5Q8TDI0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.43■□□□□ 0.22
CHD5Q8TDI0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHD5Q8TDI0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 DUX4L27-201ENST00000554796 1261 ntBASIC16.42■□□□□ 0.22
CHD5Q8TDI0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AC004790.1-201ENST00000612686 536 ntBASIC16.42■□□□□ 0.22
CHD5Q8TDI0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 KRT8P37-201ENST00000451609 1420 ntBASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AL035456.1-201ENST00000456064 1369 ntBASIC16.42■□□□□ 0.22
CHD5Q8TDI0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AC069224.1-201ENST00000566372 1715 ntBASIC16.42■□□□□ 0.22
CHD5Q8TDI0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AL513523.2-202ENST00000427283 2040 ntBASIC16.42■□□□□ 0.22
CHD5Q8TDI0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AC241585.1-201ENST00000433527 519 ntBASIC16.42■□□□□ 0.22
CHD5Q8TDI0 AC009477.1-201ENST00000452936 217 ntBASIC16.42■□□□□ 0.22
CHD5Q8TDI0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHD5Q8TDI0 BNIP3P1-202ENST00000550043 1585 ntBASIC16.42■□□□□ 0.22
CHD5Q8TDI0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD5Q8TDI0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
CHD5Q8TDI0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHD5Q8TDI0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms